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  1. Apache Drill
  2. DRILL-4243

CTAS with partition by, results in Out Of Memory

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 1.5.0
    • Fix Version/s: 1.5.0
    • Component/s: Execution - Flow
    • Labels:
      None
    • Environment:

      4 node cluster

      Description

      CTAS with partition by, results in Out Of Memory. It seems to be coming from ExternalSortBatch

      Details of Drill are

      version	commit_id	commit_message	commit_time	build_email	build_time
      1.5.0-SNAPSHOT	e4372f224a4b474494388356355a53808092a67a	DRILL-4242: Updates to storage-mongo	03.01.2016 @ 15:31:13 PST	Unknown	04.01.2016 @ 01:02:29 PST
      
       create table `tpch_single_partition/lineitem` partition by (l_moddate) as select l.*, l_shipdate - extract(day from l_shipdate) + 1 l_moddate from cp.`tpch/lineitem.parquet` l;
      Error: RESOURCE ERROR: One or more nodes ran out of memory while executing the query.
      
      Fragment 0:0
      
      [Error Id: 3323fd1c-4b78-42a7-b311-23ee73c7d550 on atsqa4-193.qa.lab:31010] (state=,code=0)
      java.sql.SQLException: RESOURCE ERROR: One or more nodes ran out of memory while executing the query.
      
      Fragment 0:0
      
      [Error Id: 3323fd1c-4b78-42a7-b311-23ee73c7d550 on atsqa4-193.qa.lab:31010]
      	at org.apache.drill.jdbc.impl.DrillCursor.nextRowInternally(DrillCursor.java:247)
      	at org.apache.drill.jdbc.impl.DrillCursor.loadInitialSchema(DrillCursor.java:290)
      	at org.apache.drill.jdbc.impl.DrillResultSetImpl.execute(DrillResultSetImpl.java:1923)
      	at org.apache.drill.jdbc.impl.DrillResultSetImpl.execute(DrillResultSetImpl.java:73)
      	at net.hydromatic.avatica.AvaticaConnection.executeQueryInternal(AvaticaConnection.java:404)
      	at net.hydromatic.avatica.AvaticaStatement.executeQueryInternal(AvaticaStatement.java:351)
      	at net.hydromatic.avatica.AvaticaStatement.executeInternal(AvaticaStatement.java:338)
      	at net.hydromatic.avatica.AvaticaStatement.execute(AvaticaStatement.java:69)
      	at org.apache.drill.jdbc.impl.DrillStatementImpl.execute(DrillStatementImpl.java:101)
      	at sqlline.Commands.execute(Commands.java:841)
      	at sqlline.Commands.sql(Commands.java:751)
      	at sqlline.SqlLine.dispatch(SqlLine.java:746)
      	at sqlline.SqlLine.runCommands(SqlLine.java:1651)
      	at sqlline.Commands.run(Commands.java:1304)
      	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
      	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
      	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
      	at java.lang.reflect.Method.invoke(Method.java:606)
      	at sqlline.ReflectiveCommandHandler.execute(ReflectiveCommandHandler.java:36)
      	at sqlline.SqlLine.dispatch(SqlLine.java:742)
      	at sqlline.SqlLine.initArgs(SqlLine.java:553)
      	at sqlline.SqlLine.begin(SqlLine.java:596)
      	at sqlline.SqlLine.start(SqlLine.java:375)
      	at sqlline.SqlLine.main(SqlLine.java:268)
      Caused by: org.apache.drill.common.exceptions.UserRemoteException: RESOURCE ERROR: One or more nodes ran out of memory while executing the query.
      
      Fragment 0:0
      
      [Error Id: 3323fd1c-4b78-42a7-b311-23ee73c7d550 on atsqa4-193.qa.lab:31010]
      	at org.apache.drill.exec.rpc.user.QueryResultHandler.resultArrived(QueryResultHandler.java:119)
      	at org.apache.drill.exec.rpc.user.UserClient.handleReponse(UserClient.java:113)
      	at org.apache.drill.exec.rpc.BasicClientWithConnection.handle(BasicClientWithConnection.java:46)
      	at org.apache.drill.exec.rpc.BasicClientWithConnection.handle(BasicClientWithConnection.java:31)
      	at org.apache.drill.exec.rpc.RpcBus.handle(RpcBus.java:69)
      	at org.apache.drill.exec.rpc.RpcBus$RequestEvent.run(RpcBus.java:400)
      	at org.apache.drill.common.SerializedExecutor$RunnableProcessor.run(SerializedExecutor.java:105)
      	at org.apache.drill.exec.rpc.RpcBus$SameExecutor.execute(RpcBus.java:264)
      	at org.apache.drill.common.SerializedExecutor.execute(SerializedExecutor.java:142)
      	at org.apache.drill.exec.rpc.RpcBus$InboundHandler.decode(RpcBus.java:298)
      	at org.apache.drill.exec.rpc.RpcBus$InboundHandler.decode(RpcBus.java:269)
      	at io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:89)
      	at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:339)
      	at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:324)
      	at io.netty.handler.timeout.IdleStateHandler.channelRead(IdleStateHandler.java:254)
      	at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:339)
      	at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:324)
      	at io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:103)
      	at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:339)
      	at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:324)
      	at io.netty.handler.codec.ByteToMessageDecoder.channelRead(ByteToMessageDecoder.java:242)
      	at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:339)
      	at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:324)
      	at io.netty.channel.ChannelInboundHandlerAdapter.channelRead(ChannelInboundHandlerAdapter.java:86)
      	at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:339)
      	at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:324)
      	at io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:847)
      	at io.netty.channel.epoll.AbstractEpollStreamChannel$EpollStreamUnsafe.epollInReady(AbstractEpollStreamChannel.java:618)
      	at io.netty.channel.epoll.EpollEventLoop.processReady(EpollEventLoop.java:329)
      	at io.netty.channel.epoll.EpollEventLoop.run(EpollEventLoop.java:250)
      	at io.netty.util.concurrent.SingleThreadEventExecutor$2.run(SingleThreadEventExecutor.java:111)
      	at java.lang.Thread.run(Thread.java:744)
      

      Stack trace from drillbit.log

      2016-01-04 01:42:11,999 [2975c18d-0e2e-1a4d-0a2b-4cacf7efba28:frag:0:0] INFO  o.a.d.e.w.fragment.FragmentExecutor - User Error Occurred
      org.apache.drill.common.exceptions.UserException: RESOURCE ERROR: One or more nodes ran out of memory while executing the query.
      
      
      [Error Id: 3323fd1c-4b78-42a7-b311-23ee73c7d550 ]
              at org.apache.drill.common.exceptions.UserException$Builder.build(UserException.java:534) ~[drill-common-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:266) [drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.common.SelfCleaningRunnable.run(SelfCleaningRunnable.java:38) [drill-common-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) [na:1.7.0_45]
              at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) [na:1.7.0_45]
              at java.lang.Thread.run(Thread.java:744) [na:1.7.0_45]
      Caused by: org.apache.drill.exec.exception.OutOfMemoryException: org.apache.drill.exec.exception.OutOfMemoryException: Unable to allocate sv2, and not enough batchGroups to spill
              at org.apache.drill.exec.physical.impl.xsort.ExternalSortBatch.innerNext(ExternalSortBatch.java:356) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:162) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:119) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:109) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractSingleRecordBatch.innerNext(AbstractSingleRecordBatch.java:51) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.physical.impl.svremover.RemovingRecordBatch.innerNext(RemovingRecordBatch.java:94) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:162) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:119) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:109) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractSingleRecordBatch.innerNext(AbstractSingleRecordBatch.java:51) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.physical.impl.project.ProjectRecordBatch.innerNext(ProjectRecordBatch.java:132) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:162) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:119) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:109) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractSingleRecordBatch.innerNext(AbstractSingleRecordBatch.java:51) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.physical.impl.project.ProjectRecordBatch.innerNext(ProjectRecordBatch.java:132) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:162) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:119) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:109) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.physical.impl.WriterRecordBatch.innerNext(WriterRecordBatch.java:91) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:162) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:119) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:109) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractSingleRecordBatch.innerNext(AbstractSingleRecordBatch.java:51) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.physical.impl.project.ProjectRecordBatch.innerNext(ProjectRecordBatch.java:132) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:162) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.physical.impl.BaseRootExec.next(BaseRootExec.java:104) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.physical.impl.ScreenCreator$ScreenRoot.innerNext(ScreenCreator.java:81) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.physical.impl.BaseRootExec.next(BaseRootExec.java:94) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.work.fragment.FragmentExecutor$1.run(FragmentExecutor.java:256) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.work.fragment.FragmentExecutor$1.run(FragmentExecutor.java:250) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at java.security.AccessController.doPrivileged(Native Method) ~[na:1.7.0_45]
              at javax.security.auth.Subject.doAs(Subject.java:415) ~[na:1.7.0_45]
              at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1595) ~[hadoop-common-2.7.0-mapr-1506.jar:na]
              at org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:250) [drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              ... 4 common frames omitted
      Caused by: org.apache.drill.exec.exception.OutOfMemoryException: Unable to allocate sv2, and not enough batchGroups to spill
              at org.apache.drill.exec.physical.impl.xsort.ExternalSortBatch.newSV2(ExternalSortBatch.java:620) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              at org.apache.drill.exec.physical.impl.xsort.ExternalSortBatch.innerNext(ExternalSortBatch.java:352) ~[drill-java-exec-1.5.0-SNAPSHOT.jar:1.5.0-SNAPSHOT]
              ... 38 common frames omitted
      

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              • Assignee:
                Unassigned
                Reporter:
                khfaraaz Khurram Faraaz
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                • Created:
                  Updated:
                  Resolved: