[BEAM-10430] Can't run WordCount on EMR With Flink Runner via YARN

• Type: Bug
• Status: Resolved
• Priority: P3
• Resolution: Not A Problem
• Affects Version/s: 2.22.0
• Fix Version/s: Missing
• Component/s: examples-java, runner-flink
• Labels: Clarified
• Environment: AWS EMR 5.30.0 running Spark 2.4.5, Flink 1.10.0
• Assignee: Etienne Chauchot
• Reporter: Shashi
• Created: 09/Jul/20 06:47
• Updated: 22/Mar/22 17:39
• Resolved: 03/Dec/21 13:36

Description

1) I setup WordCount project as detailed on Beam website..

 {{mvn archetype:generate \
-DarchetypeGroupId=org.apache.beam \
-DarchetypeArtifactId=beam-sdks-java-maven-archetypes-examples \
-DarchetypeVersion=2.22.0 \
-DgroupId=org.example \
-DartifactId=word-count-beam \
-Dversion="0.1" \
-Dpackage=org.apache.beam.examples \
-DinteractiveMode=false}}

2) mvn clean package -Pflink-runner

3) Ran the application on AWS EMR 5.30.0 with Flink 1.10.0

flink run -m yarn-cluster -yid <yarn_application_id> -p 4  -c org.apache.beam.examples.WordCount word-count-beam-bundled-0.1.jar –runner=FlinkRunner --inputFile <path_in_s3_of_input_file> --output <path_in_s3_of_output_dir>

4) Launch failed with the following exception stack trace 

java.util.ServiceConfigurationError: com.fasterxml.jackson.databind.Module: Provider com.fasterxml.jackson.module.jaxb.JaxbAnnotationModule not a subtype

at java.util.ServiceLoader.fail(ServiceLoader.java:239)

at java.util.ServiceLoader.access$300(ServiceLoader.java:185)

at java.util.ServiceLoader$LazyIterator.nextService(ServiceLoader.java:376)

at java.util.ServiceLoader$LazyIterator.next(ServiceLoader.java:404)

at java.util.ServiceLoader$1.next(ServiceLoader.java:480)

at com.fasterxml.jackson.databind.ObjectMapper.findModules(ObjectMapper.java:1054)

at org.apache.beam.sdk.options.PipelineOptionsFactory.<clinit>(PipelineOptionsFactory.java:471)

at org.apache.beam.examples.WordCount.main(WordCount.java:190)

at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)

at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)

at java.lang.reflect.Method.invoke(Method.java:498)

at org.apache.flink.client.program.PackagedProgram.callMainMethod(PackagedProgram.java:321)

at org.apache.flink.client.program.PackagedProgram.invokeInteractiveModeForExecution(PackagedProgram.java:205)

at org.apache.flink.client.ClientUtils.executeProgram(ClientUtils.java:138)

at org.apache.flink.client.cli.CliFrontend.executeProgram(CliFrontend.java:664)

at org.apache.flink.client.cli.CliFrontend.run(CliFrontend.java:213)

at org.apache.flink.client.cli.CliFrontend.parseParameters(CliFrontend.java:895)

at org.apache.flink.client.cli.CliFrontend.lambda$main$10(CliFrontend.java:968)

at java.security.AccessController.doPrivileged(Native Method)

at javax.security.auth.Subject.doAs(Subject.java:422)

at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1844)

at org.apache.flink.runtime.security.HadoopSecurityContext.runSecured(HadoopSecurityContext.java:41)

at org.apache.flink.client.cli.CliFrontend.main(CliFrontend.java:968)

Issue Links

• is duplicated by: BEAM-12595 Flink (1.12) Beam (2.30) word count example missing a dependency for the uber jar
• is duplicated by: BEAM-11753 2.27 with flink-1.12 failed rub job
• links to: GitHub Pull Request #14953