Details
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Sub-task
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Status: Resolved
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P2
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Resolution: Fixed
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None
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None
Description
Gradle task :sdks:java:io:xml:test fails during Java 11 Precommit job
Example stack trace:
> Task :sdks:java:io:xml:test org.apache.beam.sdk.io.xml.XmlIOTest > testWriteThenReadLarger STANDARD_ERROR May 26, 2020 7:29:37 AM org.apache.beam.sdk.io.WriteFiles$WriteShardsIntoTempFilesFn processElement INFO: Opening writer 4c054a13-7ff7-4b54-9398-f6bd6e531aff for window org.apache.beam.sdk.transforms.windowing.GlobalWindow@5967d09d pane PaneInfo{isFirst=true, isLast=true, timing=ON_TIME, index=0, onTimeIndex=0} destination null May 26, 2020 7:29:37 AM org.apache.beam.sdk.io.FileBasedSink$Writer open SEVERE: Beginning write to failed, closing channel. java.io.IOException: javax.xml.bind.JAXBException - with linked exception: [java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory] at org.apache.beam.sdk.io.xml.XmlIO$Sink.open(XmlIO.java:664) at org.apache.beam.sdk.io.FileIO$Write$ViaFileBasedSink$1$1.prepareWrite(FileIO.java:1390) at org.apache.beam.sdk.io.FileBasedSink$Writer.open(FileBasedSink.java:952) at org.apache.beam.sdk.io.WriteFiles$WriteShardsIntoTempFilesFn.processElement(WriteFiles.java:769) at org.apache.beam.sdk.io.WriteFiles$WriteShardsIntoTempFilesFn$DoFnInvoker.invokeProcessElement(Unknown Source) at org.apache.beam.repackaged.direct_java.runners.core.SimpleDoFnRunner.invokeProcessElement(SimpleDoFnRunner.java:227) at org.apache.beam.repackaged.direct_java.runners.core.SimpleDoFnRunner.processElement(SimpleDoFnRunner.java:183) at org.apache.beam.repackaged.direct_java.runners.core.SimplePushbackSideInputDoFnRunner.processElementInReadyWindows(SimplePushbackSideInputDoFnRunner.java:78) at org.apache.beam.runners.direct.ParDoEvaluator.processElement(ParDoEvaluator.java:240) at org.apache.beam.runners.direct.DoFnLifecycleManagerRemovingTransformEvaluator.processElement(DoFnLifecycleManagerRemovingTransformEvaluator.java:54) at org.apache.beam.runners.direct.DirectTransformExecutor.processElements(DirectTransformExecutor.java:160) at org.apache.beam.runners.direct.DirectTransformExecutor.run(DirectTransformExecutor.java:124) at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) at java.base/java.lang.Thread.run(Thread.java:834) Caused by: javax.xml.bind.JAXBException - with linked exception: [java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory] at javax.xml.bind.ContextFinder.newInstance(ContextFinder.java:241) at javax.xml.bind.ContextFinder.find(ContextFinder.java:477) at javax.xml.bind.JAXBContext.newInstance(JAXBContext.java:656) at javax.xml.bind.JAXBContext.newInstance(JAXBContext.java:599) at org.apache.beam.sdk.io.xml.XmlIO$Sink.open(XmlIO.java:659) ... 16 more Caused by: java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory at java.base/jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:583) at java.base/jdk.internal.loader.ClassLoaders$AppClassLoader.loadClass(ClassLoaders.java:178) at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:521) at javax.xml.bind.ContextFinder.safeLoadClass(ContextFinder.java:594) at javax.xml.bind.ContextFinder.newInstance(ContextFinder.java:239) ... 20 more org.apache.beam.sdk.io.xml.XmlIOTest > testWriteThenReadLarger FAILED org.apache.beam.sdk.Pipeline$PipelineExecutionException: java.io.IOException: javax.xml.bind.JAXBException - with linked exception: [java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory] at org.apache.beam.runners.direct.DirectRunner$DirectPipelineResult.waitUntilFinish(DirectRunner.java:348) at org.apache.beam.runners.direct.DirectRunner$DirectPipelineResult.waitUntilFinish(DirectRunner.java:318) at org.apache.beam.runners.direct.DirectRunner.run(DirectRunner.java:213) at org.apache.beam.runners.direct.DirectRunner.run(DirectRunner.java:67) at org.apache.beam.sdk.Pipeline.run(Pipeline.java:317) at org.apache.beam.sdk.testing.TestPipeline.run(TestPipeline.java:350) at org.apache.beam.sdk.testing.TestPipeline.run(TestPipeline.java:331) at org.apache.beam.sdk.io.xml.XmlIOTest.testWriteThenReadLarger(XmlIOTest.java:159) Caused by: java.io.IOException: javax.xml.bind.JAXBException - with linked exception: [java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory] Caused by: javax.xml.bind.JAXBException - with linked exception: [java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory] Caused by: java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory org.apache.beam.sdk.io.xml.XmlIOTest > testXmlWriteThenReadViaSinkAndReadFilesUTF8 FAILED java.lang.RuntimeException: Error when creating marshaller from JAXB Context. at org.apache.beam.sdk.io.xml.JAXBCoder$1.initialValue(JAXBCoder.java:65) at org.apache.beam.sdk.io.xml.JAXBCoder$1.initialValue(JAXBCoder.java:58) at java.lang.ThreadLocal.setInitialValue(ThreadLocal.java:195) at java.lang.ThreadLocal.get(ThreadLocal.java:172) at org.apache.beam.sdk.io.xml.JAXBCoder.encode(JAXBCoder.java:108) at org.apache.beam.sdk.io.xml.JAXBCoder.encode(JAXBCoder.java:94) at org.apache.beam.sdk.coders.IterableLikeCoder.encode(IterableLikeCoder.java:114) at org.apache.beam.sdk.coders.IterableLikeCoder.encode(IterableLikeCoder.java:60) at org.apache.beam.sdk.coders.Coder.encode(Coder.java:136) at org.apache.beam.sdk.util.CoderUtils.encodeToSafeStream(CoderUtils.java:82) at org.apache.beam.sdk.util.CoderUtils.encodeToByteArray(CoderUtils.java:66) at org.apache.beam.sdk.util.CoderUtils.encodeToByteArray(CoderUtils.java:51) at org.apache.beam.sdk.testing.PAssert$CheckRelationAgainstExpected.<init>(PAssert.java:1136) at org.apache.beam.sdk.testing.PAssert$PCollectionContentsAssert.satisfies(PAssert.java:639) at org.apache.beam.sdk.testing.PAssert$PCollectionContentsAssert.containsInAnyOrder(PAssert.java:600) at org.apache.beam.sdk.testing.PAssert$PCollectionContentsAssert.containsInAnyOrder(PAssert.java:516) at org.apache.beam.sdk.io.xml.XmlIOTest.testWriteThenRead(XmlIOTest.java:110) at org.apache.beam.sdk.io.xml.XmlIOTest.testXmlWriteThenReadViaSinkAndReadFilesUTF8(XmlIOTest.java:69) Caused by: javax.xml.bind.JAXBException - with linked exception: [java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory] at javax.xml.bind.ContextFinder.newInstance(ContextFinder.java:241) at javax.xml.bind.ContextFinder.find(ContextFinder.java:477) at javax.xml.bind.JAXBContext.newInstance(JAXBContext.java:656) at javax.xml.bind.JAXBContext.newInstance(JAXBContext.java:599) at org.apache.beam.sdk.io.xml.JAXBCoder.getContext(JAXBCoder.java:141) at org.apache.beam.sdk.io.xml.JAXBCoder.access$000(JAXBCoder.java:44) at org.apache.beam.sdk.io.xml.JAXBCoder$1.initialValue(JAXBCoder.java:62) ... 17 more Caused by: java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory at jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:583) at jdk.internal.loader.ClassLoaders$AppClassLoader.loadClass(ClassLoaders.java:178) at java.lang.ClassLoader.loadClass(ClassLoader.java:521) at javax.xml.bind.ContextFinder.safeLoadClass(ContextFinder.java:594) at javax.xml.bind.ContextFinder.newInstance(ContextFinder.java:239) ... 23 more org.apache.beam.sdk.io.xml.XmlIOTest > testXmlWriteThenReadViaWriteAndReadISO8859 FAILED java.lang.RuntimeException: Error binding classes to a JAXB Context. at org.apache.beam.sdk.io.xml.XmlIO$Write.expand(XmlIO.java:530) at org.apache.beam.sdk.io.xml.XmlIO$Write.expand(XmlIO.java:463) at org.apache.beam.sdk.Pipeline.applyInternal(Pipeline.java:542) at org.apache.beam.sdk.Pipeline.applyTransform(Pipeline.java:476) at org.apache.beam.sdk.values.PCollection.apply(PCollection.java:355) at org.apache.beam.sdk.io.xml.XmlIOTest.testWriteThenRead(XmlIOTest.java:118) at org.apache.beam.sdk.io.xml.XmlIOTest.testXmlWriteThenReadViaWriteAndReadISO8859(XmlIOTest.java:84) Caused by: javax.xml.bind.JAXBException - with linked exception: [java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory] at javax.xml.bind.ContextFinder.newInstance(ContextFinder.java:241) at javax.xml.bind.ContextFinder.find(ContextFinder.java:477) at javax.xml.bind.JAXBContext.newInstance(JAXBContext.java:656) at javax.xml.bind.JAXBContext.newInstance(JAXBContext.java:599) at org.apache.beam.sdk.io.xml.XmlIO$Write.expand(XmlIO.java:528) ... 6 more Caused by: java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory at jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:583) at jdk.internal.loader.ClassLoaders$AppClassLoader.loadClass(ClassLoaders.java:178) at java.lang.ClassLoader.loadClass(ClassLoader.java:521) at javax.xml.bind.ContextFinder.safeLoadClass(ContextFinder.java:594) at javax.xml.bind.ContextFinder.newInstance(ContextFinder.java:239) ... 10 more org.apache.beam.sdk.io.xml.XmlIOTest > testXmlWriteThenReadViaSinkAndReadFilesISO8859 FAILED java.lang.RuntimeException: Error when creating marshaller from JAXB Context. at org.apache.beam.sdk.io.xml.JAXBCoder$1.initialValue(JAXBCoder.java:65) at org.apache.beam.sdk.io.xml.JAXBCoder$1.initialValue(JAXBCoder.java:58) at java.lang.ThreadLocal.setInitialValue(ThreadLocal.java:195) at java.lang.ThreadLocal.get(ThreadLocal.java:172) at org.apache.beam.sdk.io.xml.JAXBCoder.encode(JAXBCoder.java:108) at org.apache.beam.sdk.io.xml.JAXBCoder.encode(JAXBCoder.java:94) at org.apache.beam.sdk.coders.IterableLikeCoder.encode(IterableLikeCoder.java:114) at org.apache.beam.sdk.coders.IterableLikeCoder.encode(IterableLikeCoder.java:60) at org.apache.beam.sdk.coders.Coder.encode(Coder.java:136) at org.apache.beam.sdk.util.CoderUtils.encodeToSafeStream(CoderUtils.java:82) at org.apache.beam.sdk.util.CoderUtils.encodeToByteArray(CoderUtils.java:66) at org.apache.beam.sdk.util.CoderUtils.encodeToByteArray(CoderUtils.java:51) at org.apache.beam.sdk.testing.PAssert$CheckRelationAgainstExpected.<init>(PAssert.java:1136) at org.apache.beam.sdk.testing.PAssert$PCollectionContentsAssert.satisfies(PAssert.java:639) at org.apache.beam.sdk.testing.PAssert$PCollectionContentsAssert.containsInAnyOrder(PAssert.java:600) at org.apache.beam.sdk.testing.PAssert$PCollectionContentsAssert.containsInAnyOrder(PAssert.java:516) at org.apache.beam.sdk.io.xml.XmlIOTest.testWriteThenRead(XmlIOTest.java:110) at org.apache.beam.sdk.io.xml.XmlIOTest.testXmlWriteThenReadViaSinkAndReadFilesISO8859(XmlIOTest.java:74) Caused by: javax.xml.bind.JAXBException - with linked exception: [java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory] at javax.xml.bind.ContextFinder.newInstance(ContextFinder.java:241) at javax.xml.bind.ContextFinder.find(ContextFinder.java:477) at javax.xml.bind.JAXBContext.newInstance(JAXBContext.java:656) at javax.xml.bind.JAXBContext.newInstance(JAXBContext.java:599) at org.apache.beam.sdk.io.xml.JAXBCoder.getContext(JAXBCoder.java:141) at org.apache.beam.sdk.io.xml.JAXBCoder.access$000(JAXBCoder.java:44) at org.apache.beam.sdk.io.xml.JAXBCoder$1.initialValue(JAXBCoder.java:62) ... 17 more Caused by: java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory at jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:583) at jdk.internal.loader.ClassLoaders$AppClassLoader.loadClass(ClassLoaders.java:178) at java.lang.ClassLoader.loadClass(ClassLoader.java:521) at javax.xml.bind.ContextFinder.safeLoadClass(ContextFinder.java:594) at javax.xml.bind.ContextFinder.newInstance(ContextFinder.java:239) ... 23 more org.apache.beam.sdk.io.xml.XmlIOTest > testXmlWriteThenReadViaWriteAndReadUTF8 FAILED java.lang.RuntimeException: Error binding classes to a JAXB Context. at org.apache.beam.sdk.io.xml.XmlIO$Write.expand(XmlIO.java:530) at org.apache.beam.sdk.io.xml.XmlIO$Write.expand(XmlIO.java:463) at org.apache.beam.sdk.Pipeline.applyInternal(Pipeline.java:542) at org.apache.beam.sdk.Pipeline.applyTransform(Pipeline.java:476) at org.apache.beam.sdk.values.PCollection.apply(PCollection.java:355) at org.apache.beam.sdk.io.xml.XmlIOTest.testWriteThenRead(XmlIOTest.java:118) at org.apache.beam.sdk.io.xml.XmlIOTest.testXmlWriteThenReadViaWriteAndReadUTF8(XmlIOTest.java:79) Caused by: javax.xml.bind.JAXBException - with linked exception: [java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory] at javax.xml.bind.ContextFinder.newInstance(ContextFinder.java:241) at javax.xml.bind.ContextFinder.find(ContextFinder.java:477) at javax.xml.bind.JAXBContext.newInstance(JAXBContext.java:656) at javax.xml.bind.JAXBContext.newInstance(JAXBContext.java:599) at org.apache.beam.sdk.io.xml.XmlIO$Write.expand(XmlIO.java:528) ... 6 more Caused by: java.lang.ClassNotFoundException: com.sun.xml.internal.bind.v2.ContextFactory at jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:583) at jdk.internal.loader.ClassLoaders$AppClassLoader.loadClass(ClassLoaders.java:178) at java.lang.ClassLoader.loadClass(ClassLoader.java:521) at javax.xml.bind.ContextFinder.safeLoadClass(ContextFinder.java:594) at javax.xml.bind.ContextFinder.newInstance(ContextFinder.java:239) ... 10 more org.apache.beam.sdk.io.xml.XmlSourceTest > testReadXMLWithMultiByteElementName SKIPPED Gradle Test Executor 146 started executing tests.