Hadoop's cleanup of local directory in uber mode causing failures

In out environment, we faced an issue where uberized Shell action was getting stuck even though the shell action got completed with status 0. Please refer the attached syslog and stdout if launcher job, here I point out partially

stdout :

>>> Invoking Shell command line now >>
Stdoutput myshellType=qmyshellUpdate
Exit code of the Shell command 0
<<< Invocation of Shell command completed <<<
<<< Invocation of Main class completed <<<

syslog

2016-05-23 11:15:52,587 WARN [uber-SubtaskRunner] org.apache.hadoop.mapred.LocalContainerLauncher: Unable to delete unexpected local file/dir .action.xml.crc: insufficient permissions?
2016-05-23 11:15:52,588 FATAL [AsyncDispatcher event handler] org.apache.hadoop.conf.Configuration: error parsing conf propagation-conf.xml
java.io.FileNotFoundException: /tmp/yarn-local/usercache/saley/appcache/application_1234_123/container_e01_1234_123_01_000001/propagation-conf.xml (No such file or directory)
at java.io.FileInputStream.open0(Native Method)
at java.io.FileInputStream.open(FileInputStream.java:195)
at java.io.FileInputStream.<init>(FileInputStream.java:138)
at java.io.FileInputStream.<init>(FileInputStream.java:93)
at sun.net.www.protocol.file.FileURLConnection.connect(FileURLConnection.java:90)
at sun.net.www.protocol.file.FileURLConnection.getInputStream(FileURLConnection.java:188)
at java.net.URL.openStream(URL.java:1038)
at org.apache.hadoop.conf.Configuration.parse(Configuration.java:2468)
at org.apache.hadoop.conf.Configuration.loadResource(Configuration.java:2539)
at org.apache.hadoop.conf.Configuration.loadResources(Configuration.java:2492)
at org.apache.hadoop.conf.Configuration.getProps(Configuration.java:2405)
at org.apache.hadoop.conf.Configuration.get(Configuration.java:981)
at org.apache.hadoop.conf.Configuration.getTrimmed(Configuration.java:1031)
at org.apache.hadoop.conf.Configuration.getInt(Configuration.java:1251)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl.getMemoryRequired(TaskAttemptImpl.java:568)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl.updateMillisCounters(TaskAttemptImpl.java:1295)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl.createJobCounterUpdateEventTASucceeded(TaskAttemptImpl.java:1323)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl.access$3500(TaskAttemptImpl.java:147)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl$SucceededTransition.transition(TaskAttemptImpl.java:1710)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl$SucceededTransition.transition(TaskAttemptImpl.java:1701)
at org.apache.hadoop.yarn.state.StateMachineFactory$SingleInternalArc.doTransition(StateMachineFactory.java:362)
at org.apache.hadoop.yarn.state.StateMachineFactory.doTransition(StateMachineFactory.java:302)
at org.apache.hadoop.yarn.state.StateMachineFactory.access$300(StateMachineFactory.java:46)
at org.apache.hadoop.yarn.state.StateMachineFactory$InternalStateMachine.doTransition(StateMachineFactory.java:448)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl.handle(TaskAttemptImpl.java:1085)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl.handle(TaskAttemptImpl.java:146)
at org.apache.hadoop.mapreduce.v2.app.MRAppMaster$TaskAttemptEventDispatcher.handle(MRAppMaster.java:1394)
at org.apache.hadoop.mapreduce.v2.app.MRAppMaster$TaskAttemptEventDispatcher.handle(MRAppMaster.java:1386)
at org.apache.hadoop.yarn.event.AsyncDispatcher.dispatch(AsyncDispatcher.java:184)
at org.apache.hadoop.yarn.event.AsyncDispatcher$1.run(AsyncDispatcher.java:110)
at java.lang.Thread.run(Thread.java:745)
2016-05-23 11:15:52,590 FATAL [AsyncDispatcher event handler] org.apache.hadoop.yarn.event.AsyncDispatcher: Error in dispatcher thread
java.lang.RuntimeException: java.io.FileNotFoundException: /grid/5/tmp/yarn-local/usercache/saley/appcache/application_1234_123/container_e01_1234_123_01_000001/propagation-conf.xml (No such file or directory)
at org.apache.hadoop.conf.Configuration.loadResource(Configuration.java:2639)
at org.apache.hadoop.conf.Configuration.loadResources(Configuration.java:2492)
at org.apache.hadoop.conf.Configuration.getProps(Configuration.java:2405)
at org.apache.hadoop.conf.Configuration.get(Configuration.java:981)
at org.apache.hadoop.conf.Configuration.getTrimmed(Configuration.java:1031)
at org.apache.hadoop.conf.Configuration.getInt(Configuration.java:1251)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl.getMemoryRequired(TaskAttemptImpl.java:568)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl.updateMillisCounters(TaskAttemptImpl.java:1295)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl.createJobCounterUpdateEventTASucceeded(TaskAttemptImpl.java:1323)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl.access$3500(TaskAttemptImpl.java:147)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl$SucceededTransition.transition(TaskAttemptImpl.java:1710)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl$SucceededTransition.transition(TaskAttemptImpl.java:1701)
at org.apache.hadoop.yarn.state.StateMachineFactory$SingleInternalArc.doTransition(StateMachineFactory.java:362)
at org.apache.hadoop.yarn.state.StateMachineFactory.doTransition(StateMachineFactory.java:302)
at org.apache.hadoop.yarn.state.StateMachineFactory.access$300(StateMachineFactory.java:46)
at org.apache.hadoop.yarn.state.StateMachineFactory$InternalStateMachine.doTransition(StateMachineFactory.java:448)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl.handle(TaskAttemptImpl.java:1085)
at org.apache.hadoop.mapreduce.v2.app.job.impl.TaskAttemptImpl.handle(TaskAttemptImpl.java:146)
at org.apache.hadoop.mapreduce.v2.app.MRAppMaster$TaskAttemptEventDispatcher.handle(MRAppMaster.java:1394)
at org.apache.hadoop.mapreduce.v2.app.MRAppMaster$TaskAttemptEventDispatcher.handle(MRAppMaster.java:1386)
at org.apache.hadoop.yarn.event.AsyncDispatcher.dispatch(AsyncDispatcher.java:184)
at org.apache.hadoop.yarn.event.AsyncDispatcher$1.run(AsyncDispatcher.java:110)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.io.FileNotFoundException: /tmp/yarn-local/usercache/saley/appcache/application_1234_123/container_e01_1234_123_01_000001/propagation-conf.xml (No such file or directory)
at java.io.FileInputStream.open0(Native Method)
at java.io.FileInputStream.open(FileInputStream.java:195)
at java.io.FileInputStream.<init>(FileInputStream.java:138)
at java.io.FileInputStream.<init>(FileInputStream.java:93)
at sun.net.www.protocol.file.FileURLConnection.connect(FileURLConnection.java:90)
at sun.net.www.protocol.file.FileURLConnection.getInputStream(FileURLConnection.java:188)
at java.net.URL.openStream(URL.java:1038)
at org.apache.hadoop.conf.Configuration.parse(Configuration.java:2468)
at org.apache.hadoop.conf.Configuration.loadResource(Configuration.java:2539)
... 22 more
2016-05-23 11:15:52,591 INFO [AsyncDispatcher ShutDown handler] org.apache.hadoop.yarn.event.AsyncDispatcher: Exiting, bbye..
2016-05-23 11:15:52,591 ERROR [AsyncDispatcher ShutDown handler] org.apache.hadoop.yarn.YarnUncaughtExceptionHandler: Thread Thread[AsyncDispatcher ShutDown handler,5,main] threw an Exception.
java.lang.SecurityException: Intercepted System.exit(-1)
at org.apache.oozie.action.hadoop.LauncherSecurityManager.checkExit(LauncherMapper.java:637)
at java.lang.Runtime.exit(Runtime.java:107)
at java.lang.System.exit(System.java:971)
at org.apache.hadoop.yarn.event.AsyncDispatcher$2.run(AsyncDispatcher.java:294)
at java.lang.Thread.run(Thread.java:745)
2016-05-23 11:16:44,589 WARN [LeaseRenewer:saley@namenode.com:8020] org.apache.hadoop.conf.Configuration: job.xml:an attempt to override final parameter: hadoop.tmp.dir; Ignoring.
2016-05-23 11:20:53,677 INFO Socket Reader #2 for port 50500 SecurityLogger.org.apache.hadoop.ipc.Server: Auth successful for saley (auth:SIMPLE)