[TAVERNA-884] Avoid debug messages from executeworkflow

• Type: Bug
• Status: To Do
• Priority: Major
• Resolution: Unresolved
• Component/s: Taverna Command-line Tool
• Labels: logging
• Assignee: Unassigned
• Reporter: Stian Soiland-Reyes
• Created: 19/Jan/16 14:44
• Updated: 19/Jan/16 14:53

Description

The below are debug messages that should be removed. They might come from different parts of the code of taverna-commandline and taverna-engine

 sh executeworkflow.sh  examples/helloworld.wfbundle
OpenJDK 64-Bit Server VM warning: ignoring option MaxPermSize=400m; support was removed in 8.0
log4j:ERROR A "org.apache.log4j.ConsoleAppender" object is not assignable to a "org.apache.log4j.Appender" variable.
log4j:ERROR The class "org.apache.log4j.Appender" was loaded by 
log4j:ERROR [org.eclipse.osgi.internal.baseadaptor.DefaultClassLoader@7486b455[log4j:1.2.17(id=43)]] whereas object of type 
log4j:ERROR "org.apache.log4j.ConsoleAppender" was loaded by [sun.misc.Launcher$AppClassLoader@677327b6].
log4j:ERROR Could not instantiate appender named "CONSOLE".
log4j:WARN No appenders could be found for logger (org.springframework.osgi.extender.internal.boot.ChainActivator).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
Bundle: /tmp/robundle2801827278992542627/robundle.zip
Outputs will be saved to the directory: /home/stain/src/taverna/incubator-taverna-commandline/taverna-commandline-product/target/apache-taverna-commandline-3.1.0-incubating-SNAPSHOT-dev/apache-taverna-commandline-3.1.0-incubating-SNAPSHOT/Hello_World_output
Workflow Run Bundle: /tmp/robundle2801827278992542627/robundle.zip
ERROR 2016-01-19 14:43:31,071 (org.apache.jena.riot:84) - [line: 1, col: 1 ] Content is not allowed in prolog.
Workflow completed.

This should be reduced to:

 sh executeworkflow.sh  examples/helloworld.wfbundle
Outputs will be saved to the directory: /home/stain/src/taverna/incubator-taverna-commandline/taverna-commandline-product/target/apache-taverna-commandline-3.1.0-incubating-SNAPSHOT-dev/apache-taverna-commandline-3.1.0-incubating-SNAPSHOT/Hello_World_output
Workflow completed.

Sub-Tasks

• log4j is not always configured: To Do
• Remove jena.riot warning: Content not allowed in prolog: To Do