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  1. SystemDS
  2. SYSTEMDS-3414

Pipelines failing in Hybrid execution

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Details

    • Bug
    • Status: Closed
    • Major
    • Resolution: Fixed
    • SystemDS 3.1
    • SystemDS 3.1
    • None
    • None

    Description

      Execution of an individual pipeline is failing in hybrid mode with OOM. To reproduce the error please use the attached files

      Exception in thread "main" java.lang.OutOfMemoryError: Requested array size exceeds VM limit
              at org.apache.sysds.runtime.data.DenseBlockLFP64.allocateBlock(DenseBlockLFP64.java:45)
              at org.apache.sysds.runtime.data.DenseBlockLDRB.lambda$reset$1(DenseBlockLDRB.java:77)
              at org.apache.sysds.runtime.data.DenseBlockLDRB$$Lambda$1950/0x00007f113089f168.accept(Unknown Source)
              at java.base/java.util.stream.Streams$RangeIntSpliterator.forEachRemaining(Streams.java:104)
              at java.base/java.util.stream.IntPipeline$Head.forEach(IntPipeline.java:593)
              at org.apache.sysds.runtime.data.DenseBlockLDRB.reset(DenseBlockLDRB.java:75)
              at org.apache.sysds.runtime.data.DenseBlockLFP64.<init>(DenseBlockLFP64.java:35)
              at org.apache.sysds.runtime.data.DenseBlockFactory.createDenseBlock(DenseBlockFactory.java:94)
              at org.apache.sysds.runtime.data.DenseBlockFactory.createDenseBlock(DenseBlockFactory.java:43)
              at org.apache.sysds.runtime.data.DenseBlockFactory.createDenseBlock(DenseBlockFactory.java:37)
              at org.apache.sysds.runtime.data.DenseBlockFactory.createDenseBlock(DenseBlockFactory.java:33)
              at org.apache.sysds.runtime.matrix.data.MatrixBlock.allocateDenseBlock(MatrixBlock.java:390)
              at org.apache.sysds.runtime.matrix.data.MatrixBlock.allocateDenseBlock(MatrixBlock.java:367)
              at org.apache.sysds.runtime.matrix.data.MatrixBlock.allocateDenseBlockUnsafe(MatrixBlock.java:451)
              at org.apache.sysds.runtime.io.MatrixReader.createOutputMatrixBlock(MatrixReader.java:93)
              at org.apache.sysds.runtime.io.ReaderBinaryBlockParallel.readMatrixFromHDFS(ReaderBinaryBlockParallel.java:63)
              at org.apache.sysds.runtime.util.DataConverter.readMatrixFromHDFS(DataConverter.java:235)
              at org.apache.sysds.runtime.util.DataConverter.readMatrixFromHDFS(DataConverter.java:188)
              at org.apache.sysds.runtime.controlprogram.caching.MatrixObject.readBlobFromHDFS(MatrixObject.java:445)
              at org.apache.sysds.runtime.controlprogram.caching.MatrixObject.readBlobFromHDFS(MatrixObject.java:68)
              at org.apache.sysds.runtime.controlprogram.caching.CacheableData.readBlobFromHDFS(CacheableData.java:1076)
              at org.apache.sysds.runtime.controlprogram.caching.MatrixObject.readBlobFromRDD(MatrixObject.java:504)
              at org.apache.sysds.runtime.controlprogram.caching.MatrixObject.readBlobFromRDD(MatrixObject.java:68)
              at org.apache.sysds.runtime.controlprogram.caching.CacheableData.acquireReadIntern(CacheableData.java:582)
              at org.apache.sysds.runtime.controlprogram.caching.CacheableData.acquireRead(CacheableData.java:505)
              at org.apache.sysds.runtime.controlprogram.context.ExecutionContext.getMatrixInput(ExecutionContext.java:336)
              at org.apache.sysds.runtime.instructions.cp.MatrixIndexingCPInstruction.processInstruction(MatrixIndexingCPInstruction.java:69)
              at org.apache.sysds.runtime.controlprogram.ProgramBlock.executeSingleInstruction(ProgramBlock.java:255)
              at org.apache.sysds.runtime.controlprogram.ProgramBlock.executeInstructions(ProgramBlock.java:204)
              at org.apache.sysds.runtime.controlprogram.BasicProgramBlock.execute(BasicProgramBlock.java:125)
              at org.apache.sysds.runtime.controlprogram.IfProgramBlock.execute(IfProgramBlock.java:106)
              at org.apache.sysds.runtime.controlprogram.ForProgramBlock.execute(ForProgramBlock.java:143)
       

      Attachments

        1. sparkDML.sh
          0.7 kB
          Shafaq Siddiqi
        2. pipeline1.dml
          2 kB
          Shafaq Siddiqi
        3. runPip1.sh
          0.5 kB
          Shafaq Siddiqi

        Activity

          People

            mboehm7 Matthias Boehm
            ssiddiqi Shafaq Siddiqi
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            Dates

              Created:
              Updated:
              Resolved: