[SPARK-2491] When an OOM is thrown,the executor does not stop properly.

• Type: Bug
• Status: Resolved
• Priority: Major
• Resolution: Won't Fix
• Affects Version/s: 1.1.0
• Component/s: Spark Core
• Assignee: Unassigned
• Reporter: Guoqiang Li
• Created: 15/Jul/14 12:46
• Updated: 30/Nov/15 19:19
• Resolved: 03/Nov/15 20:48

Description

The executor log:

#
# java.lang.OutOfMemoryError: Java heap space
# -XX:OnOutOfMemoryError="kill %p"
#   Executing /bin/sh -c "kill 44942"...
14/07/15 10:38:29 ERROR CoarseGrainedExecutorBackend: RECEIVED SIGNAL 15: SIGTERM
14/07/15 10:38:29 ERROR ExecutorUncaughtExceptionHandler: Uncaught exception in thread Thread[Connection manager future execution context-6,5,main]
java.lang.OutOfMemoryError: Java heap space
        at java.nio.HeapByteBuffer.<init>(HeapByteBuffer.java:57)
        at java.nio.ByteBuffer.allocate(ByteBuffer.java:331)
        at org.apache.spark.storage.BlockMessage.set(BlockMessage.scala:94)
        at org.apache.spark.storage.BlockMessage$.fromByteBuffer(BlockMessage.scala:176)
        at org.apache.spark.storage.BlockMessageArray.set(BlockMessageArray.scala:63)
        at org.apache.spark.storage.BlockMessageArray$.fromBufferMessage(BlockMessageArray.scala:109)
        at org.apache.spark.storage.BlockFetcherIterator$BasicBlockFetcherIterator$$anonfun$sendRequest$1.applyOrElse(BlockFetcherIterator.scala:125)
        at org.apache.spark.storage.BlockFetcherIterator$BasicBlockFetcherIterator$$anonfun$sendRequest$1.applyOrElse(BlockFetcherIterator.scala:122)
        at scala.concurrent.Future$$anonfun$onSuccess$1.apply(Future.scala:117)
        at scala.concurrent.Future$$anonfun$onSuccess$1.apply(Future.scala:115)
        at scala.concurrent.impl.CallbackRunnable.run(Promise.scala:32)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
        at java.lang.Thread.run(Thread.java:744)
14/07/15 10:38:29 WARN HadoopRDD: Exception in RecordReader.close()
java.io.IOException: Filesystem closed
        at org.apache.hadoop.hdfs.DFSClient.checkOpen(DFSClient.java:703)
        at org.apache.hadoop.hdfs.DFSInputStream.close(DFSInputStream.java:619)
        at java.io.FilterInputStream.close(FilterInputStream.java:181)
        at org.apache.hadoop.util.LineReader.close(LineReader.java:150)
        at org.apache.hadoop.mapred.LineRecordReader.close(LineRecordReader.java:243)
        at org.apache.spark.rdd.HadoopRDD$$anon$1.close(HadoopRDD.scala:226)
        at org.apache.spark.util.NextIterator.closeIfNeeded(NextIterator.scala:63)
        at org.apache.spark.rdd.HadoopRDD$$anon$1$$anonfun$1.apply$mcV$sp(HadoopRDD.scala:197)
        at org.apache.spark.TaskContext$$anonfun$executeOnCompleteCallbacks$1.apply(TaskContext.scala:63)
        at org.apache.spark.TaskContext$$anonfun$executeOnCompleteCallbacks$1.apply(TaskContext.scala:63)
        at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
        at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
        at org.apache.spark.TaskContext.executeOnCompleteCallbacks(TaskContext.scala:63)
        at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:156)
        at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:97)
        at org.apache.spark.scheduler.Task.run(Task.scala:51)
        at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:187)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
        at java.lang.Thread.run(Thread.java:744)


-----------------

14/07/15 10:38:30 INFO Executor: Running task ID 969
14/07/15 10:38:30 INFO BlockManager: Found block broadcast_0 locally
14/07/15 10:38:30 INFO HadoopRDD: Input split: hdfs://10dian72.domain.test:8020/input/lbs/recommend/toona/rating/20140712/part-00007:0+68016537
14/07/15 10:38:30 ERROR Executor: Exception in task ID 969
java.io.FileNotFoundException: /yarn/nm/usercache/spark/appcache/application_1404728465401_0070/spark-local-20140715103235-ffda/2e/merged_shuffle_4_85_0 (No such file or directory)
        at java.io.FileOutputStream.open(Native Method)
        at java.io.FileOutputStream.<init>(FileOutputStream.java:221)
        at org.apache.spark.storage.DiskBlockObjectWriter.open(BlockObjectWriter.scala:116)
        at org.apache.spark.storage.DiskBlockObjectWriter.write(BlockObjectWriter.scala:177)
        at org.apache.spark.shuffle.hash.HashShuffleWriter$$anonfun$write$1.apply(HashShuffleWriter.scala:59)
        at org.apache.spark.shuffle.hash.HashShuffleWriter$$anonfun$write$1.apply(HashShuffleWriter.scala:57)
        at scala.collection.Iterator$class.foreach(Iterator.scala:727)
        at scala.collection.AbstractIterator.foreach(Iterator.scala:1157)
        at org.apache.spark.shuffle.hash.HashShuffleWriter.write(HashShuffleWriter.scala:57)
        at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:147)
        at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:97)
        at org.apache.spark.scheduler.Task.run(Task.scala:51)
        at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:187)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
        at java.lang.Thread.run(Thread.java:744)
14/07/15 10:38:30 INFO Executor: java.io.FileNotFoundException (java.io.FileNotFoundException: /yarn/nm/usercache/spark/appcache/application_1404728465401_0070/spark-local-20140715103235-ffda/2e/merged_shuffle_4_85_0 (No such file or directory)}

Issue Links

• relates to: SPARK-11801 Notify driver when OOM is thrown before executor JVM is killed
• links to: [Github] Pull Request #1482 (witgo)