[CASSANDRA-11765] dtest failure in upgrade_tests.upgrade_through_versions_test.ProtoV3Upgrade_AllVersions_Skips_3_0_x_EndsAt_Trunk_HEAD.rolling_upgrade_test

• Type: Bug
• Status: Resolved
• Priority: Normal
• Resolution: Fixed
• Fix Version/s: 3.7
• Component/s: Local/Compaction
• Labels: dtest
• Severity: Normal
• Assignee: Stefania Alborghetti
• Reporter: Philip Thompson

Authors

Stefania Alborghetti

Reviewers

Marcus Eriksson

• Created: 12/May/16 15:07
• Updated: 16/Apr/19 09:30
• Resolved: 03/Jun/16 14:32

Description

Example failure:

http://cassci.datastax.com/view/Parameterized/job/upgrade_tests-all-custom_branch_runs/12/testReport/upgrade_tests.upgrade_through_versions_test/ProtoV3Upgrade_AllVersions_Skips_3_0_x_EndsAt_Trunk_HEAD/rolling_upgrade_test_2/

The test is seeing a corrupt hint sstable after upgrade from 2.2.5 to 3.6. Relevant stack trace is

ERROR [main] 2016-05-11 16:22:25,180 CassandraDaemon.java:727 - Exception encountered during startup
java.lang.RuntimeException: java.util.concurrent.ExecutionException: org.apache.cassandra.io.sstable.CorruptSSTableException: Corrupted: /mnt/tmp/dtest-X7IReF/test/node1/data2/system/hints-2666e20573ef38b390fefecf96e8f0c7/la-3-big-Data.db
	at org.apache.cassandra.hints.LegacyHintsMigrator.forceCompaction(LegacyHintsMigrator.java:119) ~[main/:na]
	at org.apache.cassandra.hints.LegacyHintsMigrator.compactLegacyHints(LegacyHintsMigrator.java:108) ~[main/:na]
	at org.apache.cassandra.hints.LegacyHintsMigrator.migrate(LegacyHintsMigrator.java:92) ~[main/:na]
	at org.apache.cassandra.service.CassandraDaemon.setup(CassandraDaemon.java:321) [main/:na]
	at org.apache.cassandra.service.CassandraDaemon.activate(CassandraDaemon.java:581) [main/:na]
	at org.apache.cassandra.service.CassandraDaemon.main(CassandraDaemon.java:710) [main/:na]
Caused by: java.util.concurrent.ExecutionException: org.apache.cassandra.io.sstable.CorruptSSTableException: Corrupted: /mnt/tmp/dtest-X7IReF/test/node1/data2/system/hints-2666e20573ef38b390fefecf96e8f0c7/la-3-big-Data.db
	at java.util.concurrent.FutureTask.report(FutureTask.java:122) ~[na:1.8.0_51]
	at java.util.concurrent.FutureTask.get(FutureTask.java:192) ~[na:1.8.0_51]
	at org.apache.cassandra.hints.LegacyHintsMigrator.forceCompaction(LegacyHintsMigrator.java:115) ~[main/:na]
	... 5 common frames omitted
Caused by: org.apache.cassandra.io.sstable.CorruptSSTableException: Corrupted: /mnt/tmp/dtest-X7IReF/test/node1/data2/system/hints-2666e20573ef38b390fefecf96e8f0c7/la-3-big-Data.db
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator.computeNext(BigTableScanner.java:351) ~[main/:na]
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator.computeNext(BigTableScanner.java:265) ~[main/:na]
	at org.apache.cassandra.utils.AbstractIterator.hasNext(AbstractIterator.java:47) ~[main/:na]
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner.hasNext(BigTableScanner.java:245) ~[main/:na]
	at org.apache.cassandra.utils.MergeIterator$OneToOne.computeNext(MergeIterator.java:463) ~[main/:na]
	at org.apache.cassandra.utils.AbstractIterator.hasNext(AbstractIterator.java:47) ~[main/:na]
	at org.apache.cassandra.db.partitions.UnfilteredPartitionIterators$2.hasNext(UnfilteredPartitionIterators.java:150) ~[main/:na]
	at org.apache.cassandra.db.transform.BasePartitions.hasNext(BasePartitions.java:72) ~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionIterator.hasNext(CompactionIterator.java:226) ~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionTask.runMayThrow(CompactionTask.java:182) ~[main/:na]
	at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28) ~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionTask.executeInternal(CompactionTask.java:82) ~[main/:na]
	at org.apache.cassandra.db.compaction.AbstractCompactionTask.execute(AbstractCompactionTask.java:60) ~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionManager$10.runMayThrow(CompactionManager.java:805) ~[main/:na]
	at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28) ~[main/:na]
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) ~[na:1.8.0_51]
	at java.util.concurrent.FutureTask.run(FutureTask.java:266) ~[na:1.8.0_51]
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) ~[na:1.8.0_51]
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) ~[na:1.8.0_51]
	at java.lang.Thread.run(Thread.java:745) ~[na:1.8.0_51]
Caused by: java.io.EOFException: null
	at org.apache.cassandra.io.util.RebufferingInputStream.readFully(RebufferingInputStream.java:68) ~[main/:na]
	at org.apache.cassandra.io.util.RebufferingInputStream.readFully(RebufferingInputStream.java:60) ~[main/:na]
	at org.apache.cassandra.io.util.TrackedDataInputPlus.readFully(TrackedDataInputPlus.java:93) ~[main/:na]
	at org.apache.cassandra.utils.ByteBufferUtil.read(ByteBufferUtil.java:400) ~[main/:na]
	at org.apache.cassandra.utils.ByteBufferUtil.readWithShortLength(ByteBufferUtil.java:375) ~[main/:na]
	at org.apache.cassandra.db.Serializers$1.deserialize(Serializers.java:109) ~[main/:na]
	at org.apache.cassandra.db.Serializers$1.deserialize(Serializers.java:89) ~[main/:na]
	at org.apache.cassandra.io.sstable.IndexInfo$Serializer.deserialize(IndexInfo.java:135) ~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$IndexedEntry.<init>(RowIndexEntry.java:651) ~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$IndexedEntry.<init>(RowIndexEntry.java:577) ~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$LegacyShallowIndexedEntry.deserialize(RowIndexEntry.java:508) ~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$Serializer.deserialize(RowIndexEntry.java:321) ~[main/:na]
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator.computeNext(BigTableScanner.java:310) ~[main/:na]
	... 19 common frames omitted
ERROR [CompactionExecutor:2] 2016-05-11 16:22:25,183 CassandraDaemon.java:213 - Exception in thread Thread[CompactionExecutor:2,1,main]
org.apache.cassandra.io.sstable.CorruptSSTableException: Corrupted: /mnt/tmp/dtest-X7IReF/test/node1/data2/system/hints-2666e20573ef38b390fefecf96e8f0c7/la-3-big-Data.db
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator.computeNext(BigTableScanner.java:351) ~[main/:na]
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator.computeNext(BigTableScanner.java:265) ~[main/:na]
	at org.apache.cassandra.utils.AbstractIterator.hasNext(AbstractIterator.java:47) ~[main/:na]
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner.hasNext(BigTableScanner.java:245) ~[main/:na]
	at org.apache.cassandra.utils.MergeIterator$OneToOne.computeNext(MergeIterator.java:463) ~[main/:na]
	at org.apache.cassandra.utils.AbstractIterator.hasNext(AbstractIterator.java:47) ~[main/:na]
	at org.apache.cassandra.db.partitions.UnfilteredPartitionIterators$2.hasNext(UnfilteredPartitionIterators.java:150) ~[main/:na]
	at org.apache.cassandra.db.transform.BasePartitions.hasNext(BasePartitions.java:72) ~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionIterator.hasNext(CompactionIterator.java:226) ~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionTask.runMayThrow(CompactionTask.java:182) ~[main/:na]
	at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28) ~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionTask.executeInternal(CompactionTask.java:82) ~[main/:na]
	at org.apache.cassandra.db.compaction.AbstractCompactionTask.execute(AbstractCompactionTask.java:60) ~[main/:na]
	at org.apache.cassandra.db.compaction.CompactionManager$10.runMayThrow(CompactionManager.java:805) ~[main/:na]
	at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28) ~[main/:na]
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) ~[na:1.8.0_51]
	at java.util.concurrent.FutureTask.run(FutureTask.java:266) ~[na:1.8.0_51]
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) ~[na:1.8.0_51]
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) [na:1.8.0_51]
	at java.lang.Thread.run(Thread.java:745) [na:1.8.0_51]
Caused by: java.io.EOFException: null
	at org.apache.cassandra.io.util.RebufferingInputStream.readFully(RebufferingInputStream.java:68) ~[main/:na]
	at org.apache.cassandra.io.util.RebufferingInputStream.readFully(RebufferingInputStream.java:60) ~[main/:na]
	at org.apache.cassandra.io.util.TrackedDataInputPlus.readFully(TrackedDataInputPlus.java:93) ~[main/:na]
	at org.apache.cassandra.utils.ByteBufferUtil.read(ByteBufferUtil.java:400) ~[main/:na]
	at org.apache.cassandra.utils.ByteBufferUtil.readWithShortLength(ByteBufferUtil.java:375) ~[main/:na]
	at org.apache.cassandra.db.Serializers$1.deserialize(Serializers.java:109) ~[main/:na]
	at org.apache.cassandra.db.Serializers$1.deserialize(Serializers.java:89) ~[main/:na]
	at org.apache.cassandra.io.sstable.IndexInfo$Serializer.deserialize(IndexInfo.java:135) ~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$IndexedEntry.<init>(RowIndexEntry.java:651) ~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$IndexedEntry.<init>(RowIndexEntry.java:577) ~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$LegacyShallowIndexedEntry.deserialize(RowIndexEntry.java:508) ~[main/:na]
	at org.apache.cassandra.db.RowIndexEntry$Serializer.deserialize(RowIndexEntry.java:321) ~[main/:na]
	at org.apache.cassandra.io.sstable.format.big.BigTableScanner$KeyScanningIterator.computeNext(BigTableScanner.java:310) ~[main/:na]
	... 19 common frames omitted

Logs are attached

Issue Links

• is related to: CASSANDRA-11763 Failure to read non-shallow pre-3.0 sstable index entries
• is related to: CASSANDRA-6696 Partition sstables by token range
• is related to: CASSANDRA-11206 Support large partitions on the 3.0 sstable format