Details
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Improvement
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Status: Open
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P3
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Resolution: Unresolved
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None
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None
Description
Dataflow runner v2 times out when attempting to run FhirIOReadIT. See below taken from,
Error Messagejava.lang.RuntimeException: Dataflow job 2020-11-05_11_17_42-14531455608914266893 terminated in state UNRECOGNIZED but did not return a failure reason.Stacktracejava.lang.RuntimeException: Dataflow job 2020-11-05_11_17_42-14531455608914266893 terminated in state UNRECOGNIZED but did not return a failure reason. at org.apache.beam.runners.dataflow.TestDataflowRunner.run(TestDataflowRunner.java:137) at org.apache.beam.runners.dataflow.TestDataflowRunner.run(TestDataflowRunner.java:93) at org.apache.beam.runners.dataflow.TestDataflowRunner.run(TestDataflowRunner.java:55) at org.apache.beam.sdk.Pipeline.run(Pipeline.java:322) at org.apache.beam.sdk.testing.TestPipeline.run(TestPipeline.java:353) at org.apache.beam.sdk.testing.TestPipeline.run(TestPipeline.java:334) at org.apache.beam.sdk.io.gcp.healthcare.FhirIOReadIT.testFhirIORead(FhirIOReadIT.java:141) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:59) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:56) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:26) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:27) at org.apache.beam.sdk.testing.TestPipeline$1.evaluate(TestPipeline.java:322) at org.apache.beam.sdk.io.gcp.pubsub.TestPubsubSignal$1.evaluate(TestPubsubSignal.java:119) at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:305) at org.junit.runners.BlockJUnit4ClassRunner$1.evaluate(BlockJUnit4ClassRunner.java:100) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:365) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:103) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:63) at org.junit.runners.ParentRunner$4.run(ParentRunner.java:330) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:78) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:328) at org.junit.runners.ParentRunner.access$100(ParentRunner.java:65) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:292) at org.junit.runners.ParentRunner.run(ParentRunner.java:412) at org.junit.runners.Suite.runChild(Suite.java:128) at org.junit.runners.Suite.runChild(Suite.java:27) at org.junit.runners.ParentRunner$4.run(ParentRunner.java:330) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:78) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:328) at org.junit.runners.ParentRunner.access$100(ParentRunner.java:65) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:292) at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:305) at org.junit.runners.ParentRunner.run(ParentRunner.java:412) at org.gradle.api.internal.tasks.testing.junit.JUnitTestClassExecutor.runTestClass(JUnitTestClassExecutor.java:110) at org.gradle.api.internal.tasks.testing.junit.JUnitTestClassExecutor.execute(JUnitTestClassExecutor.java:58) at org.gradle.api.internal.tasks.testing.junit.JUnitTestClassExecutor.execute(JUnitTestClassExecutor.java:38) at org.gradle.api.internal.tasks.testing.junit.AbstractJUnitTestClassProcessor.processTestClass(AbstractJUnitTestClassProcessor.java:62) at org.gradle.api.internal.tasks.testing.SuiteTestClassProcessor.processTestClass(SuiteTestClassProcessor.java:51) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.gradle.internal.dispatch.ReflectionDispatch.dispatch(ReflectionDispatch.java:36) at org.gradle.internal.dispatch.ReflectionDispatch.dispatch(ReflectionDispatch.java:24) at org.gradle.internal.dispatch.ContextClassLoaderDispatch.dispatch(ContextClassLoaderDispatch.java:33) at org.gradle.internal.dispatch.ProxyDispatchAdapter$DispatchingInvocationHandler.invoke(ProxyDispatchAdapter.java:94) at com.sun.proxy.$Proxy2.processTestClass(Unknown Source) at org.gradle.api.internal.tasks.testing.worker.TestWorker.processTestClass(TestWorker.java:119) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.gradle.internal.dispatch.ReflectionDispatch.dispatch(ReflectionDispatch.java:36) at org.gradle.internal.dispatch.ReflectionDispatch.dispatch(ReflectionDispatch.java:24) at org.gradle.internal.remote.internal.hub.MessageHubBackedObjectConnection$DispatchWrapper.dispatch(MessageHubBackedObjectConnection.java:182) at org.gradle.internal.remote.internal.hub.MessageHubBackedObjectConnection$DispatchWrapper.dispatch(MessageHubBackedObjectConnection.java:164) at org.gradle.internal.remote.internal.hub.MessageHub$Handler.run(MessageHub.java:414) at org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:64) at org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:48) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) at org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:56) at java.lang.Thread.run(Thread.java:748) Standard ErrorNov 05, 2020 7:17:38 PM org.apache.beam.runners.dataflow.options.DataflowPipelineOptions$StagingLocationFactory create INFO: No stagingLocation provided, falling back to gcpTempLocation Nov 05, 2020 7:17:38 PM org.apache.beam.runners.dataflow.DataflowRunner fromOptions INFO: PipelineOptions.filesToStage was not specified. Defaulting to files from the classpath: will stage 192 files. Enable logging at DEBUG level to see which files will be staged. Nov 05, 2020 7:17:38 PM org.apache.beam.runners.dataflow.DataflowRunner run INFO: Executing pipeline on the Dataflow Service, which will have billing implications related to Google Compute Engine usage and other Google Cloud Services. Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil stageClasspathElements INFO: Uploading 192 files from PipelineOptions.filesToStage to staging location to prepare for execution. Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/ext/nashorn.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/nashorn-weeJq8xr1W-ffsRkpgrFg66NefWMxBPhafowFeapEsY.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/ext/cldrdata.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/cldrdata--3pIGDz0tykt6hQVlSefvGETdLTd8pz6QA8Oj1jX2Y4.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/ext/jaccess.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/jaccess-DzM64XoqEdbBRPhGAOEVMAF8LTN_E28nVoF1_u6R-DU.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/ext/icedtea-sound.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/icedtea-sound-tEt5wMgYFL8mkvO1Nm1dAmO9fvf4mArcHueR5cs-qQg.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/ext/localedata.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/localedata-Y-NaSUIR-qgmElwFjZTiOAAb6QEm2MH6gcwn3DEwCWg.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/jenkins-slave/workspace/beam_PostCommit_Java_PR/src/sdks/java/io/google-cloud-platform/build/libs/beam-sdks-java-io-google-cloud-platform-2.26.0-SNAPSHOT-tests.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/beam-sdks-java-io-google-cloud-platform-2.26.0-SNAPSHOT-tests-vFCci4lVb45iID3r2-nt2uSSeCwGQUV9mgllBGEjuho.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/ext/dnsns.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/dnsns-uSg1gkDGFvpq4Uf7wO4Y7yAPInDffxy1qXhy__GVCJE.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/jenkins-slave/workspace/beam_PostCommit_Java_PR/src/sdks/java/testing/test-utils/build/libs/beam-sdks-java-test-utils-2.26.0-SNAPSHOT.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/beam-sdks-java-test-utils-2.26.0-SNAPSHOT-DtLJVHyFd3tnA5VugsJ_qyw5teg6Ai_9RvdxdYsJjCo.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/jenkins-slave/workspace/beam_PostCommit_Java_PR/src/sdks/java/io/google-cloud-platform/build/libs/beam-sdks-java-io-google-cloud-platform-2.26.0-SNAPSHOT.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/beam-sdks-java-io-google-cloud-platform-2.26.0-SNAPSHOT-1dGp5FxTnnOOCRWIC7tE2q5c3_lNhoP3Cfz4zhLkbaY.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/jenkins-slave/workspace/beam_PostCommit_Java_PR/src/runners/google-cloud-dataflow-java/build/libs/beam-runners-google-cloud-dataflow-java-2.26.0-SNAPSHOT.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/beam-runners-google-cloud-dataflow-java-2.26.0-SNAPSHOT-Yaae_rrUu51uuO-am5CKjvdwHNeY0ItRI9aVI2Uc6IE.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.apis/google-api-services-clouddebugger/v2-rev20200501-1.30.10/b33ff2dddd08848ea3f267bbddd636554eab43d8/google-api-services-clouddebugger-v2-rev20200501-1.30.10.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/google-api-services-clouddebugger-v2-rev20200501-1.30.10-bU7wrCFf0eFwDFdYM5XXmUMgLpTGll41LtaPtLf_5Yc.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/6.6.1/workerMain/gradle-worker.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/gradle-worker-Zm3C6vA4jcVGL6xmBX4pYeQ7ZWEYKWYU8BFmqRj_sbY.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/jenkins-slave/workspace/beam_PostCommit_Java_PR/src/runners/core-construction-java/build/libs/beam-runners-core-construction-java-2.26.0-SNAPSHOT.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/beam-runners-core-construction-java-2.26.0-SNAPSHOT-CP7FBOHrhj1OwwD8uG_jp8Zj16pTaC_rRKO-OabAHS4.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.cloud/google-cloud-pubsublite/0.4.1/7b29e4c23bd256e4a8e1b0bf2c8dc084018885da/google-cloud-pubsublite-0.4.1.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/google-cloud-pubsublite-0.4.1-gkhtuNLWYpqJw3DosTF3Ihhg31PKulS2HpXWhRIVwcQ.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/jenkins-slave/workspace/beam_PostCommit_Java_PR/src/sdks/java/extensions/google-cloud-platform-core/build/libs/beam-sdks-java-extensions-google-cloud-platform-core-2.26.0-SNAPSHOT.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/beam-sdks-java-extensions-google-cloud-platform-core-2.26.0-SNAPSHOT-daeRqKdCdruXyfBtQSCCe1FMPNkw9vgchLbNcFUvQ0o.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.apis/google-api-services-storage/v1-rev20200611-1.30.10/189adae8ea043984d3814717203b470ab0517373/google-api-services-storage-v1-rev20200611-1.30.10.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/google-api-services-storage-v1-rev20200611-1.30.10-INrcnpWLWvkN-Mf-ig-ab-lYg9NBuztZDHchmNhVCVc.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.api-client/google-api-client-java6/1.30.10/bab94eb59b41c2a0087ce53588ff33d7af15c13b/google-api-client-java6-1.30.10.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/google-api-client-java6-1.30.10-m2I4oHqNXjz0pJ-TP3zK5_cofaMLXRJwTHexGAhXg04.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/jenkins-slave/workspace/beam_PostCommit_Java_PR/src/sdks/java/extensions/google-cloud-platform-core/build/libs/beam-sdks-java-extensions-google-cloud-platform-core-2.26.0-SNAPSHOT-tests.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/beam-sdks-java-extensions-google-cloud-platform-core-2.26.0-SNAPSHOT-tests-qiFRXwkGTFcuhltsQ01ApY7391fK70v625jjwR9DfEM.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.apis/google-api-services-iamcredentials/v1-rev20200821-1.30.10/d0ddf6ba0b5599c62a57420bd33df819d7dfcf9b/google-api-services-iamcredentials-v1-rev20200821-1.30.10.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/google-api-services-iamcredentials-v1-rev20200821-1.30.10-OAu7Yvvak4L5eFeOFBa4RsEgC6IZzRXwerQT9XfVJfU.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.api-client/google-api-client/1.30.10/2de98417199785982e1f037fb8b52613f57175ae/google-api-client-1.30.10.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/google-api-client-1.30.10-7bDzALb3Oeai2wPM6a7-ITpWzwAmZClXyRvl43ox-lE.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.cloud.bigdataoss/gcsio/2.1.5/f567c088cd61c4a45528e629d7ca876ac6d3c13e/gcsio-2.1.5.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/gcsio-2.1.5-XiTjuj_1W0gVA52hXABQO5oEg38aDAyFp-qyyYn1KxU.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/jenkins-slave/workspace/beam_PostCommit_Java_PR/src/runners/java-fn-execution/build/libs/beam-runners-java-fn-execution-2.26.0-SNAPSHOT.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/beam-runners-java-fn-execution-2.26.0-SNAPSHOT-p2D-xPXwEc41hl5L-Fhk54iNgoV0-GpqXDh9XX2Xs2M.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.apis/google-api-services-healthcare/v1beta1-rev20200713-1.30.10/e91837f3ef70393435477f24da1d8037079de665/google-api-services-healthcare-v1beta1-rev20200713-1.30.10.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/google-api-services-healthcare-v1beta1-rev20200713-1.30.10-JURWP1dWIZvDBGhzx49rM9wlx_3gzI-7LaDigoy5pnc.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/jenkins-slave/workspace/beam_PostCommit_Java_PR/src/sdks/java/expansion-service/build/libs/beam-sdks-java-expansion-service-2.26.0-SNAPSHOT.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/beam-sdks-java-expansion-service-2.26.0-SNAPSHOT-tKwu6vnI2Yl5xhDsy13t6uhpxFjn-IQ_QxgChrHMgFs.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/jenkins-slave/workspace/beam_PostCommit_Java_PR/src/sdks/java/testing/test-utils/build/libs/beam-sdks-java-test-utils-2.26.0-SNAPSHOT-tests.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/beam-sdks-java-test-utils-2.26.0-SNAPSHOT-tests-f4kaqi2Who4QPLHGFm_4c_1VjhYGUp7nQnzSkyGnfYg.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/jenkins-slave/workspace/beam_PostCommit_Java_PR/src/sdks/java/extensions/protobuf/build/libs/beam-sdks-java-extensions-protobuf-2.26.0-SNAPSHOT.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/beam-sdks-java-extensions-protobuf-2.26.0-SNAPSHOT-1Um84_c940LYUeudbocXJwpSMqWK61twLSydx0U6Jyg.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.cloud.bigtable/bigtable-client-core/1.16.0/fc4b7d81d4d88ff07db6c41bfab14a55257ec83a/bigtable-client-core-1.16.0.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/bigtable-client-core-1.16.0-rXHzid2z3SKS6HT3WghaWJ5LCzXNwKF6Lr3bNsFanCU.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.apis/google-api-services-dataflow/v1b3-rev20200713-1.30.10/9c7cdb809d0594a4c3347c299c85d89e85617769/google-api-services-dataflow-v1b3-rev20200713-1.30.10.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/google-api-services-dataflow-v1b3-rev20200713-1.30.10-7G9SCylELI7xiLyl0DMKUipZJEhBA78X2SidesnpR-E.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.cloud.bigdataoss/util/2.1.5/98b67ee60462b60e7b39a9ea8ac9ff2cfbcd9aaa/util-2.1.5.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/util-2.1.5-0lQX9DQKwA-7jVYiHozkCJktCZStN_hIGizqkn-pcjQ.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.cloud.datastore/datastore-v1-proto-client/1.6.3/b0ffaeb68af9cb99772aa9933aa9baa0521568dc/datastore-v1-proto-client-1.6.3.jar to 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Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.api.grpc/proto-google-cloud-bigquerystorage-v1beta1/0.105.5/101ec42612252f0dae056aa921cd1cc91edb4b5d/proto-google-cloud-bigquerystorage-v1beta1-0.105.5.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/proto-google-cloud-bigquerystorage-v1beta1-0.105.5-Dh2HSp5OU3h7DfnHuh6HnGrEUkv0zDifNlrq7BzMCzI.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.api.grpc/proto-google-cloud-pubsublite-v1/0.4.1/dd9558fc4130977ea4bf5990e39e065436c75319/proto-google-cloud-pubsublite-v1-0.4.1.jar to 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org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.api.grpc/proto-google-cloud-bigtable-v2/1.16.1/491ffd44e9579bf3bebbae775fb224edcd9c56c9/proto-google-cloud-bigtable-v2-1.16.1.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/proto-google-cloud-bigtable-v2-1.16.1-irmT0YYJNGK9ZtO68-q2BwjUaA5mVr73-85pv78QCck.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.cloud/google-cloud-core-grpc/1.93.9/8e457065c64dea3e7b78221c66045a6a94af0bcc/google-cloud-core-grpc-1.93.9.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/google-cloud-core-grpc-1.93.9-gn9vcSprP9em-qLleYQPi5k0XRZv_rogx-L8QfXRNOA.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.http-client/google-http-client-jackson2/1.36.0/67db1dddd1c5e4a9bf3ea1354d85bafae675b33d/google-http-client-jackson2-1.36.0.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/google-http-client-jackson2-1.36.0-ZBMVy9W29KBp3MjVnmj8_6RywV8JbhGAhe58prLtV0k.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.cloud/google-cloud-core/1.93.9/9664e8c72ca5c97c0a59527e96e8bc6d80989dc1/google-cloud-core-1.93.9.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/google-cloud-core-1.93.9-PTxYtnmGp7wSGlnpFuC0LRyy3BOX6EtxfSfKGzswcNg.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/io.grpc/grpc-alts/1.32.2/e32e4ade445f93b09eb3a924adb6cf411a9a8327/grpc-alts-1.32.2.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/grpc-alts-1.32.2--ZC6OnLbAv2d_q5SI7JiYWDRIvoZhuBdpNxqpfNveQA.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.api.grpc/grpc-google-cloud-pubsub-v1/1.90.3/cda2d2198dce16ea7ac3f073afb7dff61c28f32f/grpc-google-cloud-pubsub-v1-1.90.3.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/grpc-google-cloud-pubsub-v1-1.90.3-Q_VUemZYwiDLmCk9OitPhtsVxt7vr-i8YHFVnt0VseY.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.oauth-client/google-oauth-client/1.31.0/bf1cfbbaa2497d0a841ea0363df4a61170d5823b/google-oauth-client-1.31.0.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/google-oauth-client-1.31.0-9fiaR9DCEOJ3VPxypLVvfxhohPwMB0pyoLY-Gc52QtA.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.api/gax-grpc/1.60.0/ed1056de75146a30b017d55f297c9f28e2a8922c/gax-grpc-1.60.0.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/gax-grpc-1.60.0-Xuw2oxIR3hNAKv-V9lPLlR2j0xen0qUx_JjjLFXGYUM.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading 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INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.http-client/google-http-client/1.36.0/81a880befb2f1cc22b1cb97bb562494c055016f9/google-http-client-1.36.0.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/google-http-client-1.36.0-FsJUVitseNIt0cjra4WIpHzf3Qfw6ECLJ9kZQss8Jys.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/io.grpc/grpc-auth/1.32.2/492893d071e70e06538345cc4acb51558bb25403/grpc-auth-1.32.2.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0dstu20-jenkins-1105191738-b856a511/output/results/staging/grpc-auth-1.32.2-tXVw3UA6m9k1LDfn19L7hdIL7IdVNGEkn3Nkk5j64u8.jar Nov 05, 2020 7:17:39 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading 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org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/com.google.j2objc/j2objc-annotations/1.3/ba035118bc8bac37d7eff77700720999acd9986d/j2objc-annotations-1.3.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0r40-jenkins-1105193820-fe18def6/output/results/staging/j2objc-annotations-1.3-Ia8wySJnvWEiwOC00gzMtmQaN-r5VsZUDsRx1YTmSns.jar Nov 05, 2020 7:38:23 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading /home/jenkins/.gradle/caches/modules-2/files-2.1/org.apache.httpcomponents/httpcore/4.4.13/853b96d3afbb7bf8cc303fe27ee96836a10c1834/httpcore-4.4.13.jar to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0r40-jenkins-1105193820-fe18def6/output/results/staging/httpcore-4.4.13-4G6J1AlDJF_Po57FN82_zjdirs3o-cWXeA0rAMK0NCQ.jar Nov 05, 2020 7:38:23 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading 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gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0r40-jenkins-1105193820-fe18def6/output/results/staging/javassist-3.24.0-GA-q6ge-meLYhID-4mu_4HW8Sb3qd1wlAHlYJxCl2aEriM.jar Nov 05, 2020 7:38:26 PM org.apache.beam.runners.dataflow.util.PackageUtil stageClasspathElements INFO: Staging files complete: 0 files cached, 192 files newly uploaded in 4 seconds Nov 05, 2020 7:38:26 PM org.apache.beam.runners.dataflow.DataflowPipelineTranslator$Translator addStep INFO: Adding PubsubIO.Read/PubsubUnboundedSource as step s1 Nov 05, 2020 7:38:26 PM org.apache.beam.runners.dataflow.DataflowPipelineTranslator$Translator addStep INFO: Adding PubsubIO.Read/MapElements/Map as step s2 Nov 05, 2020 7:38:26 PM org.apache.beam.runners.dataflow.DataflowPipelineTranslator$Translator addStep INFO: Adding FhirIO.Read/Fetch Fhir messages/ParMultiDo(ReadResource) as step s3 Nov 05, 2020 7:38:26 PM org.apache.beam.runners.dataflow.DataflowPipelineTranslator$Translator addStep INFO: Adding 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Nov 05, 2020 7:38:26 PM org.apache.beam.runners.dataflow.DataflowPipelineTranslator$Translator addStep INFO: Adding TestPubsubSignal.PublishStart/Start signal/Impulse as step s10 Nov 05, 2020 7:38:26 PM org.apache.beam.runners.dataflow.DataflowPipelineTranslator$Translator addStep INFO: Adding TestPubsubSignal.PublishStart/Start signal/ParDo(DecodeAndEmit) as step s11 Nov 05, 2020 7:38:26 PM org.apache.beam.runners.dataflow.DataflowPipelineTranslator$Translator addStep INFO: Adding TestPubsubSignal.PublishStart/PubsubIO.Write/ParDo(PubsubBoundedWriter) as step s12 Nov 05, 2020 7:38:26 PM org.apache.beam.runners.dataflow.DataflowRunner run INFO: Staging pipeline description to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0r40-jenkins-1105193820-fe18def6/output/results/staging/ Nov 05, 2020 7:38:26 PM org.apache.beam.runners.dataflow.util.PackageUtil tryStagePackage INFO: Uploading <102210 bytes, hash ad85cbd4ebc1b6d674690cce3481940d997843049cd069b9affe52b65fece27b> to gs://temp-storage-for-validates-runner-tests/fhirioreadit0testfhirioread0r40-jenkins-1105193820-fe18def6/output/results/staging/pipeline-rYXL1OvBttZ0aQzONIGUDZl4QwSc0Gm5r_5Stl_s4ns.pb Nov 05, 2020 7:38:26 PM org.apache.beam.runners.dataflow.DataflowRunner run INFO: Dataflow SDK version: 2.26.0-SNAPSHOT Nov 05, 2020 7:38:28 PM org.apache.beam.runners.dataflow.DataflowRunner run INFO: To access the Dataflow monitoring console, please navigate to https://console.cloud.google.com/dataflow/jobs/us-central1/2020-11-05_11_38_26-10074857311721434453?project=apache-beam-testing Nov 05, 2020 7:38:28 PM org.apache.beam.runners.dataflow.DataflowRunner run INFO: Submitted job: 2020-11-05_11_38_26-10074857311721434453 Nov 05, 2020 7:38:28 PM org.apache.beam.runners.dataflow.DataflowRunner run INFO: To cancel the job using the 'gcloud' tool, run: > gcloud dataflow jobs --project=apache-beam-testing cancel --region=us-central1 2020-11-05_11_38_26-10074857311721434453 Nov 05, 2020 7:38:28 PM org.apache.beam.runners.dataflow.TestDataflowRunner run INFO: Running Dataflow job 2020-11-05_11_38_26-10074857311721434453 with 0 expected assertions. Nov 05, 2020 7:38:29 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process WARNING: 2020-11-05T19:38:26.963Z: Autoscaling is enabled for Dataflow Streaming Engine. Workers will scale between 1 and 100 unless maxNumWorkers is specified. Nov 05, 2020 7:38:29 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:26.963Z: Autoscaling is enabled for job 2020-11-05_11_38_26-10074857311721434453. The number of workers will be between 1 and 100. Nov 05, 2020 7:38:29 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:26.963Z: Autoscaling was automatically enabled for job 2020-11-05_11_38_26-10074857311721434453. Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:35.827Z: Worker configuration: n1-standard-4 in us-central1-f. Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:36.670Z: Expanding SplittableParDo operations into optimizable parts. Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:36.701Z: Expanding CollectionToSingleton operations into optimizable parts. Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:36.781Z: Expanding CoGroupByKey operations into optimizable parts. Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:36.820Z: Expanding SplittableProcessKeyed operations into optimizable parts. Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:36.861Z: Expanding GroupByKey operations into streaming Read/Write steps Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:36.895Z: Lifting ValueCombiningMappingFns into MergeBucketsMappingFns Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:36.976Z: Fusing adjacent ParDo, Read, Write, and Flatten operations Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:37.009Z: Fusing consumer PubsubIO.Read/MapElements/Map into PubsubIO.Read/PubsubUnboundedSource Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:37.042Z: Fusing consumer TestPubsubSignal.PublishStart/Start signal/ParDo(DecodeAndEmit) into TestPubsubSignal.PublishStart/Start signal/Impulse Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:37.068Z: Fusing consumer TestPubsubSignal.PublishStart/PubsubIO.Write/ParDo(PubsubBoundedWriter) into TestPubsubSignal.PublishStart/Start signal/ParDo(DecodeAndEmit) Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:37.104Z: Fusing consumer FhirIO.Read/Fetch Fhir messages/ParMultiDo(ReadResource) into PubsubIO.Read/MapElements/Map Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:37.146Z: Fusing consumer waitForAnyMessage/Window.Into()/Window.Assign into FhirIO.Read/Fetch Fhir messages/ParMultiDo(ReadResource) Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:37.198Z: Fusing consumer waitForAnyMessage/WithKeys/AddKeys/Map into waitForAnyMessage/Window.Into()/Window.Assign Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:37.230Z: Fusing consumer waitForAnyMessage/publishSuccess/MapElements/Map into waitForAnyMessage/checkAllEventsForSuccess Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:37.276Z: Fusing consumer waitForAnyMessage/publishSuccess/PubsubUnboundedSink/Output Serialized PubsubMessage Proto/Map into waitForAnyMessage/publishSuccess/MapElements/Map Nov 05, 2020 7:38:37 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:37.313Z: Fusing consumer waitForAnyMessage/publishSuccess/PubsubUnboundedSink/DataflowRunnerV2PubsubSink into waitForAnyMessage/publishSuccess/PubsubUnboundedSink/Output Serialized PubsubMessage Proto/Map Nov 05, 2020 7:38:39 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:38.836Z: Starting 1 workers in us-central1-f... Nov 05, 2020 7:38:48 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:38:47.068Z: Your project already contains 100 Dataflow-created metric descriptors, so new user metrics of the form custom.googleapis.com/* will not be created. However, all user metrics are also available in the metric dataflow.googleapis.com/job/user_counter. If you rely on the custom metrics, you can delete old / unused metric descriptors. See https://developers.google.com/apis-explorer/#p/monitoring/v3/monitoring.projects.metricDescriptors.list and https://developers.google.com/apis-explorer/#p/monitoring/v3/monitoring.projects.metricDescriptors.delete Nov 05, 2020 7:39:19 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:39:19.600Z: Autoscaling: Raised the number of workers to 1 so that the pipeline can catch up with its backlog and keep up with its input rate. Nov 05, 2020 7:40:15 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:40:15.312Z: Workers have started successfully. Nov 05, 2020 7:40:15 PM org.apache.beam.runners.dataflow.util.MonitoringUtil$LoggingHandler process INFO: 2020-11-05T19:40:15.339Z: Workers have started successfully. Nov 05, 2020 7:48:28 PM org.apache.beam.runners.dataflow.DataflowPipelineJob waitUntilFinish WARNING: No terminal state was returned within allotted timeout. State value RUNNING Nov 05, 2020 7:48:28 PM org.apache.beam.runners.dataflow.TestDataflowRunner waitForStreamingJobTermination INFO: Dataflow job 2020-11-05_11_38_26-10074857311721434453 took longer than 600 seconds to complete, cancelling. Nov 05, 2020 7:48:28 PM org.apache.beam.runners.dataflow.TestDataflowRunner run WARNING: Dataflow job 2020-11-05_11_38_26-10074857311721434453 did not output a success or failure metric.