[DRILL-2727] CTAS select * from CSV file results in Exception

• Type: Bug
• Status: Closed
• Priority: Major
• Resolution: Duplicate
• Affects Version/s: 0.9.0
• Fix Version/s: 1.2.0
• Component/s: Storage - Other

Environment

4 node cluster on CentOS

9d92b8e319f2d46e8659d903d355450e15946533

DRILL-2580: Exit early from HashJoinBatch if build side is empty

26.03.2015 @ 16:13:53 EDT

• Assignee: Jacques Nadeau
• Reporter: Khurram Faraaz
• Created: 09/Apr/15 00:47
• Updated: 15/Sep/15 19:35
• Resolved: 11/Sep/15 22:50

Description

CREATE TABLE csv_tbl as SELECT * FROM `input.csv`
results in Exception, with message Repeated types are not supported

0: jdbc:drill:> create table newCSV_Int_tbl12 as select * from `int_f.csv`;
Query failed: Query stopped., Repeated types are not supported. [ 84ab8d15-6aac-42bb-908a-d663e7453abf on centos-02.qa.lab:31010 ]


Error: exception while executing query: Failure while executing query. (state=,code=0)

0: jdbc:drill:> create table newCSV_Int_tbl12 as select * from `int_f.csv`;
Query failed: Query stopped., Repeated types are not supported. [ 84ab8d15-6aac-42bb-908a-d663e7453abf on centos-02.qa.lab:31010 ]


Error: exception while executing query: Failure while executing query. (state=,code=0)
0: jdbc:drill:> create table newCSV_Int_tbl13 as select columns[0] from `int_f.csv`;
+------------+---------------------------+
|  Fragment  | Number of records written |
+------------+---------------------------+
| 0_0        | 12                        |
+------------+---------------------------+
1 row selected (0.146 seconds)
0: jdbc:drill:> select * from newCSV_Int_tbl13;
+------------+
|  columns   |
+------------+
| ["EXPR$0"] |
| ["1"]      |
| ["0"]      |
| ["-1"]     |
| ["65535"]  |
| ["1234567"] |
| ["1000000"] |
| ["101010"] |
| ["11111"]  |
| ["100"]    |
| ["13"]     |
| ["19"]     |
| ["17"]     |
+------------+
13 rows selected (0.117 seconds)

Stack trace from drillbit.log

org.apache.drill.exec.rpc.RemoteRpcException: Failure while running fragment., Repeated types are not supported. [ 0b36b8c1-3d1e-40a4-9937-aade9ead445b on centos-02.qa.lab:31010 ]
[ 0b36b8c1-3d1e-40a4-9937-aade9ead445b on centos-02.qa.lab:31010 ]

        at org.apache.drill.exec.work.foreman.QueryManager.statusUpdate(QueryManager.java:163) [drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.work.foreman.QueryManager$RootStatusReporter.statusChange(QueryManager.java:281) [drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.work.fragment.AbstractStatusReporter.fail(AbstractStatusReporter.java:114) [drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.work.fragment.AbstractStatusReporter.fail(AbstractStatusReporter.java:110) [drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.work.fragment.FragmentExecutor.internalFail(FragmentExecutor.java:230) [drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:165) [drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.common.SelfCleaningRunnable.run(SelfCleaningRunnable.java:38) [drill-common-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) [na:1.7.0_75]
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) [na:1.7.0_75]
        at java.lang.Thread.run(Thread.java:745) [na:1.7.0_75]
2015-04-09 00:37:48,977 [2ada3623-63c8-3c52-31cd-45c219efd25f:frag:0:0] WARN  o.a.d.e.w.fragment.FragmentExecutor - Error while initializing or executing fragment
java.lang.RuntimeException: Error closing fragment context.
        at org.apache.drill.exec.work.fragment.FragmentExecutor.closeOutResources(FragmentExecutor.java:224) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:166) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.common.SelfCleaningRunnable.run(SelfCleaningRunnable.java:38) [drill-common-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) [na:1.7.0_75]
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) [na:1.7.0_75]
        at java.lang.Thread.run(Thread.java:745) [na:1.7.0_75]
Caused by: java.lang.UnsupportedOperationException: Repeated types are not supported.
        at org.apache.drill.exec.store.StringOutputRecordWriter$RepeatedVarCharStringFieldConverter.writeField(StringOutputRecordWriter.java:1556) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.store.EventBasedRecordWriter.write(EventBasedRecordWriter.java:58) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.physical.impl.WriterRecordBatch.innerNext(WriterRecordBatch.java:116) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:142) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.physical.impl.validate.IteratorValidatorBatchIterator.next(IteratorValidatorBatchIterator.java:118) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:99) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:89) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.record.AbstractSingleRecordBatch.innerNext(AbstractSingleRecordBatch.java:51) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.physical.impl.project.ProjectRecordBatch.innerNext(ProjectRecordBatch.java:134) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:142) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.physical.impl.validate.IteratorValidatorBatchIterator.next(IteratorValidatorBatchIterator.java:118) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.physical.impl.BaseRootExec.next(BaseRootExec.java:68) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.physical.impl.ScreenCreator$ScreenRoot.innerNext(ScreenCreator.java:96) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.physical.impl.BaseRootExec.next(BaseRootExec.java:58) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:163) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        ... 4 common frames omitted
2015-04-09 00:37:48,978 [2ada3623-63c8-3c52-31cd-45c219efd25f:frag:0:0] ERROR o.a.drill.exec.ops.FragmentContext - Fragment Context received failure -- Fragment: 0:0
java.lang.RuntimeException: Error closing fragment context.
        at org.apache.drill.exec.work.fragment.FragmentExecutor.closeOutResources(FragmentExecutor.java:224) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:166) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.common.SelfCleaningRunnable.run(SelfCleaningRunnable.java:38) [drill-common-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) [na:1.7.0_75]
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) [na:1.7.0_75]
        at java.lang.Thread.run(Thread.java:745) [na:1.7.0_75]
Caused by: java.lang.UnsupportedOperationException: Repeated types are not supported.
        at org.apache.drill.exec.store.StringOutputRecordWriter$RepeatedVarCharStringFieldConverter.writeField(StringOutputRecordWriter.java:1556) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.store.EventBasedRecordWriter.write(EventBasedRecordWriter.java:58) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.physical.impl.WriterRecordBatch.innerNext(WriterRecordBatch.java:116) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:142) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.physical.impl.validate.IteratorValidatorBatchIterator.next(IteratorValidatorBatchIterator.java:118) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:99) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:89) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.record.AbstractSingleRecordBatch.innerNext(AbstractSingleRecordBatch.java:51) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.physical.impl.project.ProjectRecordBatch.innerNext(ProjectRecordBatch.java:134) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.record.AbstractRecordBatch.next(AbstractRecordBatch.java:142) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.physical.impl.validate.IteratorValidatorBatchIterator.next(IteratorValidatorBatchIterator.java:118) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.physical.impl.BaseRootExec.next(BaseRootExec.java:68) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.physical.impl.ScreenCreator$ScreenRoot.innerNext(ScreenCreator.java:96) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.physical.impl.BaseRootExec.next(BaseRootExec.java:58) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        at org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:163) ~[drill-java-exec-0.9.0-SNAPSHOT-rebuffed.jar:0.9.0-SNAPSHOT]
        ... 4 common frames omitted

data used in the CSV file was

[root@centos-01 csv_dir]# cat int_f.csv 
1
0
-1
65535
1234567
1000000
101010
11111
100
13
19
17

Issue Links

• duplicates: DRILL-1954 Update CSV Writer to treat a single RepeatedVarChar column as separate columns on output rather than Erroring